PH01000159G0330's details annotation
1.Annotation
ICBR annotation: 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed
Blast result AT3G14270 : 6.00E-123
Blast annotation: phosphatidylinositol-4-phosphate 5-kinase family protein
2.Location
Scaffold: PH01000159
Strand: +
| Region | Start | End |
| gene | 275142 | 280429 |
| mRNA | 275142 | 280429 |
| exon | 275142 | 275572 |
| exon | 275734 | 275889 |
| exon | 276126 | 276239 |
| exon | 276556 | 278040 |
| exon | 278184 | 280429 |
| CDS | 275459 | 275572 |
| CDS | 275734 | 275889 |
| CDS | 276126 | 276239 |
| CDS | 276556 | 278040 |
| CDS | 278184 | 278198 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01504.17 | PIP5K | 563 | 624 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005524 | ATP binding |
| GO:0016307 | phosphatidylinositol phosphate kinase activity |
| GO:0044267 | cellular protein metabolic process |
| GO:0046488 | phosphatidylinositol metabolic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.