PH01000160G0790's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G65960 : 8.00E-72
Blast annotation: GTP binding
2.Location
Scaffold: PH01000160
Strand: -
| Region | Start | End |
| gene | 626771 | 630349 |
| mRNA | 626771 | 630349 |
| exon | 626771 | 627587 |
| exon | 627874 | 628002 |
| exon | 628887 | 629242 |
| exon | 629653 | 629713 |
| exon | 630045 | 630349 |
| CDS | 627070 | 627587 |
| CDS | 627874 | 628002 |
| CDS | 628887 | 629242 |
| CDS | 629653 | 629713 |
| CDS | 630045 | 630135 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10199.8 | Adaptin_binding | 176 | 367 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.