PH01000161G0210's details annotation
1.Annotation
ICBR annotation: ATP synthase epsilon chain, mitochondrial, putative, expressed
Blast result AT1G51650 : 1.00E-25
Blast annotation: ATP synthase epsilon chain, mitochondrial
2.Location
Scaffold: PH01000161
Strand: -
| Region | Start | End |
| gene | 191895 | 194563 |
| mRNA | 191895 | 194563 |
| exon | 191895 | 192044 |
| exon | 194019 | 194563 |
| CDS | 192022 | 192044 |
| CDS | 194019 | 194205 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04627.12 | ATP-synt_Eps | 10 | 57 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Oxidative phosphorylation | F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.-] | ko00190 | K02135 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0000275 | mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) |
| GO:0015986 | ATP synthesis coupled proton transport |
| GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism |
| GO:0046961 | proton-transporting ATPase activity, rotational mechanism |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.