PH01000161G0230's details annotation
1.Annotation
ICBR annotation: thioredoxin domain-containing protein 9, putative, expressed
Blast result AT2G18990 : 9.40E-75
Blast annotation: thioredoxin domain-containing protein 9 homolog
2.Location
Scaffold: PH01000161
Strand: +
| Region | Start | End |
| gene | 205677 | 207609 |
| mRNA | 205677 | 207609 |
| exon | 205677 | 206237 |
| exon | 206344 | 206616 |
| exon | 206801 | 207609 |
| CDS | 206214 | 206237 |
| CDS | 206344 | 206616 |
| CDS | 206801 | 206818 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00085.19 | Thioredoxin | 73 | 154 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0045454 | cell redox homeostasis |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.