PH01000162G0280's details annotation
1.Annotation
ICBR annotation: serine/threonine-protein phosphatase BSL2, putative, expressed
Blast result AT2G27210 : 0.00E+00
Blast annotation: BRI1 suppressor 1 (BSU1)-like 3
2.Location
Scaffold: PH01000162
Strand: -
| Region | Start | End |
| gene | 228128 | 233366 |
| mRNA | 228128 | 233366 |
| exon | 228128 | 229283 |
| exon | 229611 | 229750 |
| exon | 229839 | 229974 |
| exon | 230057 | 230132 |
| exon | 230229 | 230428 |
| exon | 230517 | 230615 |
| exon | 230715 | 230799 |
| exon | 231088 | 231326 |
| exon | 231593 | 231763 |
| exon | 231956 | 232199 |
| exon | 232316 | 233366 |
| CDS | 229185 | 229283 |
| CDS | 229611 | 229750 |
| CDS | 229839 | 229974 |
| CDS | 230057 | 230132 |
| CDS | 230229 | 230428 |
| CDS | 230517 | 230615 |
| CDS | 230715 | 230799 |
| CDS | 231088 | 231326 |
| CDS | 231593 | 231763 |
| CDS | 231956 | 232199 |
| CDS | 232316 | 232818 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00149.27 | Metallophos | 355 | 562 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016787 | hydrolase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.