PH01000165G1080's details annotation
1.Annotation
ICBR annotation: hydrolase, alpha/beta fold family domain containing protein, expressed
Blast result AT5G53050 : 4.30E-92
Blast annotation: alpha/beta-Hydrolases superfamily protein
2.Location
Scaffold: PH01000165
Strand: +
| Region | Start | End |
| gene | 663170 | 665228 |
| mRNA | 663170 | 665228 |
| exon | 663170 | 663475 |
| exon | 663618 | 663837 |
| exon | 664201 | 664283 |
| exon | 664375 | 664475 |
| exon | 664604 | 664699 |
| exon | 664804 | 664857 |
| exon | 665060 | 665228 |
| CDS | 663367 | 663475 |
| CDS | 663618 | 663837 |
| CDS | 664201 | 664283 |
| CDS | 664375 | 664475 |
| CDS | 664604 | 664699 |
| CDS | 664804 | 664857 |
| CDS | 665060 | 665083 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00561.19 | Abhydrolase_1 | 79 | 161 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.