PH01000170G0750's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G52280 : 8.00E-38
Blast annotation: Myosin heavy chain-related protein
2.Location
Scaffold: PH01000170
Strand: -
| Region | Start | End |
| gene | 504199 | 513212 |
| mRNA | 504199 | 513212 |
| exon | 504199 | 504600 |
| exon | 505624 | 505763 |
| exon | 505926 | 508856 |
| exon | 509169 | 509239 |
| exon | 511569 | 511660 |
| exon | 511847 | 511884 |
| exon | 512633 | 512755 |
| exon | 512891 | 513088 |
| exon | 513129 | 513212 |
| CDS | 504399 | 504600 |
| CDS | 505624 | 505763 |
| CDS | 505926 | 508856 |
| CDS | 509169 | 509239 |
| CDS | 511569 | 511660 |
| CDS | 511847 | 511884 |
| CDS | 512633 | 512755 |
| CDS | 512891 | 513088 |
| CDS | 513129 | 513194 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10358.8 | NT-C2 | 43 | 138 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.