PH01000171G0550's details annotation
1.Annotation
ICBR annotation: casein kinase II subunit beta-4, putative, expressed
Blast result AT2G44680 : 3.10E-85
Blast annotation: casein kinase II beta subunit 4
2.Location
Scaffold: PH01000171
Strand: -
| Region | Start | End |
| gene | 432968 | 434354 |
| mRNA | 432968 | 434354 |
| exon | 432968 | 433096 |
| exon | 433432 | 434354 |
| CDS | 433080 | 433096 |
| CDS | 433432 | 433582 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01214.17 | CK_II_beta | 86 | 230 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Ribosome biogenesis in eukaryotes | casein kinase II subunit beta | ko03008 | K03115 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005956 | protein kinase CK2 complex |
| GO:0019887 | protein kinase regulator activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.