PH01000171G0560's details annotation
1.Annotation
ICBR annotation: calcineurin B, putative, expressed
Blast result AT5G47100 : 7.70E-94
Blast annotation: calcineurin B-like protein 9
2.Location
Scaffold: PH01000171
Strand: -
| Region | Start | End |
| gene | 438771 | 442752 |
| mRNA | 438771 | 442752 |
| exon | 438771 | 438873 |
| exon | 439454 | 439566 |
| exon | 439679 | 439759 |
| exon | 440011 | 440105 |
| exon | 440144 | 440252 |
| exon | 440382 | 440441 |
| exon | 441111 | 441193 |
| exon | 441510 | 442752 |
| CDS | 438810 | 438873 |
| CDS | 439454 | 439566 |
| CDS | 439679 | 439759 |
| CDS | 440011 | 440105 |
| CDS | 440144 | 440252 |
| CDS | 440382 | 440441 |
| CDS | 441111 | 441193 |
| CDS | 441510 | 441588 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13499.5 | EF-hand_7 | 125 | 188 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005509 | calcium ion binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.