PH01000173G1030's details annotation
1.Annotation
ICBR annotation: remorin C-terminal domain containing protein, putative, expressed
Blast result AT1G45207 : 2.50E-63
Blast annotation: Remorin family protein
2.Location
Scaffold: PH01000173
Strand: -
| Region | Start | End |
| gene | 700871 | 704996 |
| mRNA | 700871 | 704996 |
| exon | 700871 | 701465 |
| exon | 701577 | 701658 |
| exon | 702645 | 703002 |
| exon | 703631 | 704169 |
| exon | 704290 | 704407 |
| exon | 704491 | 704589 |
| exon | 704678 | 704996 |
| CDS | 701268 | 701465 |
| CDS | 701577 | 701658 |
| CDS | 702645 | 703002 |
| CDS | 703631 | 704169 |
| CDS | 704290 | 704407 |
| CDS | 704491 | 704589 |
| CDS | 704678 | 704768 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03763.12 | Remorin_C | 383 | 482 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.