PH01000180G0830's details annotation
1.Annotation
ICBR annotation: fructose-bisphospate aldolase isozyme, putative, expressed
Blast result AT4G26530 : 5.60E-76
Blast annotation: Aldolase superfamily protein
2.Location
Scaffold: PH01000180
Strand: -
| Region | Start | End |
| gene | 571439 | 575385 |
| mRNA | 571439 | 575385 |
| exon | 571439 | 571713 |
| exon | 572150 | 572193 |
| exon | 573416 | 573893 |
| exon | 574813 | 575385 |
| CDS | 571616 | 571713 |
| CDS | 572150 | 572193 |
| CDS | 573416 | 573893 |
| CDS | 574813 | 575011 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000277 | Valine,_leucine_and_isoleucine_biosynthesis Alanine,_aspartate_and_glutamate_metabolism SNARE_interactions_in_vesicular_transport fructose-bisphosphate aldolase activity, glycolysis, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00274.18 | Glycolytic | 68 | 228 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0004332 | fructose-bisphosphate aldolase activity |
| GO:0006096 | glycolysis |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.