PH01000184G1180's details annotation
1.Annotation
ICBR annotation: metal ion binding protein, putative, expressed
Blast result AT3G62010 : 2.00E-172
Blast annotation: -
2.Location
Scaffold: PH01000184
Strand: +
| Region | Start | End |
| gene | 886765 | 891836 |
| mRNA | 886765 | 891836 |
| exon | 886765 | 887265 |
| exon | 888933 | 889064 |
| exon | 889230 | 889301 |
| exon | 889669 | 889739 |
| exon | 889820 | 889919 |
| exon | 890005 | 890103 |
| exon | 890445 | 890571 |
| exon | 890850 | 890983 |
| exon | 891062 | 891121 |
| exon | 891213 | 891836 |
| CDS | 887086 | 887265 |
| CDS | 888933 | 889064 |
| CDS | 889230 | 889301 |
| CDS | 889669 | 889739 |
| CDS | 889820 | 889919 |
| CDS | 890005 | 890103 |
| CDS | 890445 | 890571 |
| CDS | 890850 | 890983 |
| CDS | 891062 | 891121 |
| CDS | 891213 | 891452 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF14566.5 | PTPlike_phytase | 98 | 252 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.