PH01000189G0760's details annotation
1.Annotation
ICBR annotation: isoflavone reductase homolog IRL, putative, expressed
Blast result AT4G39230 : 3.00E-115
Blast annotation: NmrA-like negative transcriptional regulator family protein
2.Location
Scaffold: PH01000189
Strand: -
| Region | Start | End |
| gene | 624709 | 630340 |
| mRNA | 624709 | 630340 |
| exon | 624709 | 626156 |
| exon | 626257 | 626460 |
| exon | 626602 | 626839 |
| exon | 627712 | 627846 |
| exon | 630015 | 630340 |
| CDS | 625990 | 626156 |
| CDS | 626257 | 626460 |
| CDS | 626602 | 626839 |
| CDS | 627712 | 627846 |
| CDS | 630015 | 630218 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05368.12 | NmrA | 14 | 268 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.