PH01000191G0660's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G05950 : 2.00E-32
Blast annotation: -
2.Location
Scaffold: PH01000191
Strand: +
| Region | Start | End |
| gene | 434819 | 442125 |
| mRNA | 434819 | 442125 |
| exon | 434819 | 435698 |
| exon | 436692 | 437199 |
| exon | 437967 | 438117 |
| exon | 438531 | 438638 |
| exon | 438748 | 439181 |
| exon | 439269 | 439345 |
| exon | 440464 | 440536 |
| exon | 441481 | 442125 |
| CDS | 435543 | 435698 |
| CDS | 436692 | 437199 |
| CDS | 437967 | 438117 |
| CDS | 438531 | 438638 |
| CDS | 438748 | 439181 |
| CDS | 439269 | 439345 |
| CDS | 440464 | 440536 |
| CDS | 441481 | 441671 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.