PH01000193G1250's details annotation
1.Annotation
ICBR annotation: Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed
Blast result AT4G08170 : 1.00E-100
Blast annotation: Inositol 1,3,4-trisphosphate 5/6-kinase family protein
2.Location
Scaffold: PH01000193
Strand: -
| Region | Start | End |
| gene | 864398 | 871779 |
| mRNA | 864398 | 871779 |
| exon | 864398 | 864666 |
| exon | 865258 | 865342 |
| exon | 865418 | 865473 |
| exon | 865766 | 865942 |
| exon | 866048 | 866167 |
| exon | 867870 | 867962 |
| exon | 868539 | 868659 |
| exon | 868983 | 869015 |
| exon | 869206 | 869287 |
| exon | 870559 | 871779 |
| CDS | 864572 | 864666 |
| CDS | 865258 | 865342 |
| CDS | 865418 | 865473 |
| CDS | 865766 | 865942 |
| CDS | 866048 | 866167 |
| CDS | 867870 | 867962 |
| CDS | 868539 | 868659 |
| CDS | 868983 | 869015 |
| CDS | 869206 | 869287 |
| CDS | 870559 | 870824 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05770.10 | Ins134_P3_kin | 81 | 361 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Inositol phosphate metabolism | inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate1-kinase[EC:2.7.1.159;EC:2.7.1.134] | ko00562 | K00913 |
| Phosphatidylinositol signaling system | inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate1-kinase[EC:2.7.1.159;EC:2.7.1.134] | ko04070 | K00913 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0000287 | magnesium ion binding |
| GO:0005524 | ATP binding |
| GO:0005622 | intracellular |
| GO:0032957 | inositol trisphosphate metabolic process |
| GO:0047325 | inositol tetrakisphosphate 1-kinase activity |
| GO:0052725 | inositol-1,3,4-trisphosphate 6-kinase activity |
| GO:0052726 | inositol-1,3,4-trisphosphate 5-kinase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.