PH01000199G0390's details annotation
1.Annotation
ICBR annotation: pentatricopeptide, putative
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000199
Strand: +
| Region | Start | End |
| gene | 318599 | 322689 |
| mRNA | 318599 | 322689 |
| exon | 318599 | 318922 |
| exon | 319477 | 319863 |
| exon | 321746 | 322078 |
| exon | 322270 | 322689 |
| CDS | 318654 | 318922 |
| CDS | 319477 | 319863 |
| CDS | 321746 | 322078 |
| CDS | 322270 | 322366 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000127 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01535.19 | PPR | 255 | 274 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.