PH01000202G1020's details annotation
1.Annotation
ICBR annotation: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed
Blast result AT5G21090 : 1.70E-70
Blast annotation: Leucine-rich repeat (LRR) family protein
2.Location
Scaffold: PH01000202
Strand: -
| Region | Start | End |
| gene | 752762 | 760572 |
| mRNA | 752762 | 760572 |
| exon | 752762 | 752852 |
| exon | 753081 | 753152 |
| exon | 753257 | 753328 |
| exon | 754746 | 754889 |
| exon | 759259 | 759330 |
| exon | 759968 | 760572 |
| CDS | 752783 | 752852 |
| CDS | 753081 | 753152 |
| CDS | 753257 | 753328 |
| CDS | 754746 | 754889 |
| CDS | 759259 | 759330 |
| CDS | 759968 | 760197 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08263.11 | LRRNT_2 | 29 | 68 |
| PF13855.5 | LRR_8 | 97 | 156 |
| PF00560.32 | LRR_1 | 169 | 187 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.