PH01000205G0190's details annotation
1.Annotation
ICBR annotation: AMP-binding domain containing protein, expressed
Blast result AT1G67550 : 8.60E-63
Blast annotation: urease
2.Location
Scaffold: PH01000205
Strand: -
| Region | Start | End |
| gene | 163912 | 169524 |
| mRNA | 163912 | 169524 |
| exon | 163912 | 164900 |
| exon | 165027 | 165185 |
| exon | 165278 | 165407 |
| exon | 166386 | 166462 |
| exon | 168588 | 169524 |
| CDS | 164862 | 164900 |
| CDS | 165027 | 165185 |
| CDS | 165278 | 165407 |
| CDS | 166386 | 166462 |
| CDS | 168588 | 168674 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01979.19 | Amidohydro_1 | 2 | 152 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006807 | nitrogen compound metabolic process |
| GO:0009039 | urease activity |
| GO:0016151 | nickel cation binding |
| GO:0016787 | hydrolase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.