PH01000210G0760's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G49710 : 1.60E-48
Blast annotation: -
2.Location
Scaffold: PH01000210
Strand: -
| Region | Start | End |
| gene | 525172 | 529033 |
| mRNA | 525172 | 529033 |
| exon | 525172 | 526062 |
| exon | 526145 | 526172 |
| exon | 526575 | 526747 |
| exon | 526900 | 526990 |
| exon | 528252 | 529033 |
| CDS | 525950 | 526062 |
| CDS | 526145 | 526172 |
| CDS | 526575 | 526747 |
| CDS | 526900 | 526990 |
| CDS | 528252 | 528416 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000351 | katanin_complex SAGA-type_complex |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.