PH01000214G0560's details annotation
1.Annotation
ICBR annotation: aluminum-activated malate transporter, putative, expressed
Blast result AT3G18440 : 1.80E-51
Blast annotation: aluminum-activated malate transporter 9
2.Location
Scaffold: PH01000214
Strand: +
| Region | Start | End |
| gene | 351920 | 355014 |
| mRNA | 351920 | 355014 |
| exon | 351920 | 352346 |
| exon | 352470 | 352610 |
| exon | 352810 | 353079 |
| exon | 353179 | 353303 |
| exon | 353416 | 355014 |
| CDS | 352037 | 352346 |
| CDS | 352470 | 352610 |
| CDS | 352810 | 353079 |
| CDS | 353179 | 353303 |
| CDS | 353416 | 354174 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF11744.7 | ALMT | 48 | 332 |
| PF11744.7 | ALMT | 354 | 522 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0015743 | malate transport |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.