PH01000214G1150's details annotation
1.Annotation
ICBR annotation: profilin domain containing protein, expressed
Blast result AT2G19760 : 3.30E-56
Blast annotation: profilin 1
2.Location
Scaffold: PH01000214
Strand: +
| Region | Start | End |
| gene | 715770 | 716763 |
| mRNA | 715770 | 716763 |
| exon | 715770 | 716056 |
| exon | 716160 | 716297 |
| exon | 716421 | 716763 |
| CDS | 715934 | 716056 |
| CDS | 716160 | 716297 |
| CDS | 716421 | 716555 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000257 | actin cytoskeleton organization, actin binding, ATP biosynthetic process, ATP_catabolic_process Oxidative_phosphorylation |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00235.18 | Profilin | 1 | 130 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003779 | actin binding |
| GO:0030036 | actin cytoskeleton organization |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.