PH01000219G0690's details annotation 1.Annotation ICBR annotation: homeobox associated leucine zipper, putative, expressed
Blast result AT3G01220 : 5.40E-44 Blast annotation: homeobox protein 20 2.Location Scaffold: PH01000219 Strand: - Region | Start | End | gene | 396312 | 399637 | mRNA | 396312 | 399637 | exon | 396312 | 396889 | exon | 397296 | 399637 | CDS | 396494 | 396889 | CDS | 397296 | 397742 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM000957 | DDT Transcription_Regulator(from iTAK) CMGC_CDK-PITSLRE (from iTAK) HB-HD-ZIP Transcription_Regulator(from iTAK) HD-ZIP Transcription_Regulator(from PlantTFDB) plant-type cell wall organization, Ether_lipid_metabolism Endocytosis Glycerophospholipid_metabolism extracellular region,
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5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family Category | Family | Transcription_Regulator(from iTAK) | HB-HD-ZIP | Transcription_Regulator(from PlantTFDB) | HD-ZIP |
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF00046.28 | Homeobox | 61 | 114 | PF02183.17 | HALZ | 116 | 155 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | null | null | null | null |
10.Gene Ontology GO Accession | GO Annotation | GO:0000976 | transcription regulatory region sequence-specific DNA binding | GO:0003677 | DNA binding | GO:0003700 | sequence-specific DNA binding transcription factor activity | GO:0005634 | nucleus | GO:0006355 | regulation of transcription, DNA-dependent | GO:0043565 | sequence-specific DNA binding |
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