PH01000223G1050's details annotation
1.Annotation
ICBR annotation: oxidoreductase, aldo/keto reductase family protein, putative, expressed
Blast result AT2G37770 : 7.00E-107
Blast annotation: NAD(P)-linked oxidoreductase superfamily protein
2.Location
Scaffold: PH01000223
Strand: +
| Region | Start | End |
| gene | 731562 | 733376 |
| mRNA | 731562 | 733376 |
| exon | 731562 | 731802 |
| exon | 732166 | 732216 |
| exon | 732343 | 732419 |
| exon | 732528 | 732615 |
| exon | 732691 | 732963 |
| exon | 733035 | 733376 |
| CDS | 731689 | 731802 |
| CDS | 732166 | 732216 |
| CDS | 732343 | 732419 |
| CDS | 732528 | 732615 |
| CDS | 732691 | 732963 |
| CDS | 733035 | 733319 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00248.20 | Aldo_ket_red | 29 | 277 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.