PH01000225G0310's details annotation
1.Annotation
ICBR annotation: OsWAK53b - OsWAK receptor-like protein kinase, expressed
Blast result AT1G79670 : 5.30E-46
Blast annotation: Wall-associated kinase family protein
2.Location
Scaffold: PH01000225
Strand: -
| Region | Start | End |
| gene | 191350 | 195921 |
| mRNA | 191350 | 195921 |
| exon | 191350 | 192144 |
| exon | 193123 | 194015 |
| exon | 194392 | 194444 |
| exon | 194663 | 194725 |
| exon | 194977 | 195921 |
| CDS | 191522 | 192144 |
| CDS | 193123 | 194015 |
| CDS | 194392 | 194444 |
| CDS | 194663 | 194725 |
| CDS | 194977 | 195003 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000031 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13947.5 | GUB_WAK_bind | 80 | 186 |
| PF08488.10 | WAK | 216 | 329 |
| PF00069.24 | Pkinase | 346 | 486 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016021 | integral to membrane |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
| GO:0030247 | polysaccharide binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.