PH01000226G0740's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT4G03420 : 4.90E-77
Blast annotation: Protein of unknown function (DUF789)
2.Location
Scaffold: PH01000226
Strand: -
| Region | Start | End |
| gene | 531841 | 538292 |
| mRNA | 531841 | 538292 |
| exon | 531841 | 532556 |
| exon | 533109 | 533247 |
| exon | 533748 | 533833 |
| exon | 534989 | 535080 |
| exon | 535428 | 535513 |
| exon | 535596 | 535797 |
| exon | 535890 | 536107 |
| exon | 536632 | 538292 |
| CDS | 532294 | 532556 |
| CDS | 533109 | 533247 |
| CDS | 533748 | 533833 |
| CDS | 534989 | 535080 |
| CDS | 535428 | 535513 |
| CDS | 535596 | 535797 |
| CDS | 535890 | 536107 |
| CDS | 536632 | 536727 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05623.11 | DUF789 | 12 | 313 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.