PH01000228G0690's details annotation
1.Annotation
ICBR annotation: tetratricopeptide repeat protein 5, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000228
Strand: +
| Region | Start | End |
| gene | 410071 | 413780 |
| mRNA | 410071 | 413780 |
| exon | 410071 | 410460 |
| exon | 411704 | 411813 |
| exon | 411902 | 412012 |
| exon | 412094 | 412151 |
| exon | 413292 | 413299 |
| exon | 413568 | 413780 |
| CDS | 410217 | 410460 |
| CDS | 411704 | 411813 |
| CDS | 411902 | 412012 |
| CDS | 412094 | 412151 |
| CDS | 413292 | 413299 |
| CDS | 413568 | 413591 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.