PH01000231G0480's details annotation
1.Annotation
ICBR annotation: pleiotropic drug resistance protein, putative, expressed
Blast result AT1G15520 : 8.00E-109
Blast annotation: pleiotropic drug resistance 12
2.Location
Scaffold: PH01000231
Strand: -
| Region | Start | End |
| gene | 372120 | 374492 |
| mRNA | 372120 | 374492 |
| exon | 372120 | 372395 |
| exon | 372497 | 372751 |
| exon | 372861 | 373032 |
| exon | 373119 | 373480 |
| exon | 373811 | 374492 |
| CDS | 372138 | 372395 |
| CDS | 372497 | 372751 |
| CDS | 372861 | 373032 |
| CDS | 373119 | 373480 |
| CDS | 373811 | 373897 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01061.23 | ABC2_membrane | 106 | 319 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.