PH01000233G0290's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G08450 : 0.00E+00
Blast annotation: -
2.Location
Scaffold: PH01000233
Strand: -
| Region | Start | End |
| gene | 209309 | 214608 |
| mRNA | 209309 | 214608 |
| exon | 209309 | 210053 |
| exon | 210143 | 210309 |
| exon | 210631 | 210827 |
| exon | 211063 | 211130 |
| exon | 211273 | 211386 |
| exon | 211527 | 211621 |
| exon | 211718 | 211816 |
| exon | 211899 | 211959 |
| exon | 212346 | 212521 |
| exon | 212971 | 212978 |
| exon | 213209 | 214608 |
| CDS | 209943 | 210053 |
| CDS | 210143 | 210309 |
| CDS | 210631 | 210827 |
| CDS | 211063 | 211130 |
| CDS | 211273 | 211386 |
| CDS | 211527 | 211621 |
| CDS | 211718 | 211816 |
| CDS | 211899 | 211959 |
| CDS | 212346 | 212521 |
| CDS | 212971 | 212978 |
| CDS | 213209 | 214515 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08642.9 | Rxt3 | 483 | 525 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.