PH01000235G0790's details annotation
1.Annotation
ICBR annotation: formin-like protein 1 precursor, putative, expressed
Blast result AT3G25500 : 4.00E-140
Blast annotation: formin homology 1
2.Location
Scaffold: PH01000235
Strand: -
| Region | Start | End |
| gene | 533884 | 538685 |
| mRNA | 533884 | 538685 |
| exon | 533884 | 535055 |
| exon | 535240 | 535563 |
| exon | 535884 | 535975 |
| exon | 536190 | 536380 |
| exon | 537908 | 538685 |
| CDS | 534228 | 535055 |
| CDS | 535240 | 535563 |
| CDS | 535884 | 535975 |
| CDS | 536190 | 536380 |
| CDS | 537908 | 538350 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02181.22 | FH2 | 150 | 568 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003779 | actin binding |
| GO:0016043 | cellular component organization |
| GO:0030036 | actin cytoskeleton organization |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.