PH01000237G0810's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G28520 : 2.00E-118
Blast annotation: vascular plant one zinc finger protein
2.Location
Scaffold: PH01000237
Strand: +
| Region | Start | End |
| gene | 551666 | 555025 |
| mRNA | 551666 | 555025 |
| exon | 551666 | 552428 |
| exon | 553371 | 553899 |
| exon | 553992 | 555025 |
| CDS | 551775 | 552428 |
| CDS | 553371 | 553899 |
| CDS | 553992 | 554815 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Transcription_Regulator(from iTAK) | VOZ |
| Transcription_Regulator(from PlantTFDB) | VOZ |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.