PH01000239G0530's details annotation
1.Annotation
ICBR annotation: UPF0496 protein 2, putative
Blast result AT1G20180 : 6.20E-23
Blast annotation: Protein of unknown function (DUF677)
2.Location
Scaffold: PH01000239
Strand: +
| Region | Start | End |
| gene | 365272 | 367689 |
| mRNA | 365272 | 367689 |
| exon | 365272 | 367689 |
| CDS | 365651 | 366646 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000047 | isomerase activity, Brassinosteroid_biosynthesis carbohydrate metabolic process, carbohydrate binding, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05055.11 | DUF677 | 16 | 327 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.