PH01000240G0050's details annotation
1.Annotation
ICBR annotation: uncharacterized kinase mug58, putative, expressed
Blast result AT1G80380 : 3.00E-149
Blast annotation: P-loop containing nucleoside triphosphate hydrolases superfamily protein
2.Location
Scaffold: PH01000240
Strand: -
| Region | Start | End |
| gene | 30176 | 34307 |
| mRNA | 30176 | 34307 |
| exon | 30176 | 30453 |
| exon | 30932 | 30982 |
| exon | 31082 | 31198 |
| exon | 31282 | 31356 |
| exon | 31441 | 31509 |
| exon | 31589 | 31620 |
| exon | 31807 | 31885 |
| exon | 31985 | 32026 |
| exon | 32138 | 32189 |
| exon | 32276 | 32355 |
| exon | 32797 | 33173 |
| exon | 33803 | 34307 |
| CDS | 30310 | 30453 |
| CDS | 30932 | 30982 |
| CDS | 31082 | 31198 |
| CDS | 31282 | 31356 |
| CDS | 31441 | 31509 |
| CDS | 31589 | 31620 |
| CDS | 31807 | 31885 |
| CDS | 31985 | 32026 |
| CDS | 32138 | 32189 |
| CDS | 32276 | 32355 |
| CDS | 32797 | 33173 |
| CDS | 33803 | 33968 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Glyoxylate and dicarboxylate metabolism | D-glycerate 3-kinase [EC:2.7.1.31] | ko00630 | K15918 |
| Glycerolipid metabolism | D-glycerate 3-kinase [EC:2.7.1.31] | ko00561 | K15918 |
| 282 Glycine, serine and threonine metabolism | D-glycerate 3-kinase [EC:2.7.1.31] | K15918 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005524 | ATP binding |
| GO:0008152 | metabolic process |
| GO:0016301 | kinase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.