PH01000240G1000's details annotation
1.Annotation
ICBR annotation: transcription factor Dp, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000240
Strand: +
| Region | Start | End |
| gene | 637525 | 639254 |
| mRNA | 637525 | 639254 |
| exon | 637525 | 637948 |
| exon | 638035 | 638103 |
| exon | 638218 | 638313 |
| exon | 638793 | 639254 |
| CDS | 637904 | 637948 |
| CDS | 638035 | 638103 |
| CDS | 638218 | 638313 |
| CDS | 638793 | 639005 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000341 | exosome_(RNase_complex) COP9_signalosome |
| coexpression network | CFinderM001187 | glycogen biosynthetic process, 'de novo' IMP biosynthetic process, 5-(carboxyamino)imidazole_ribonucleotide_mutase_activity |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08781.9 | DP | 10 | 94 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.