PH01000246G0510's details annotation
1.Annotation
ICBR annotation: 1,3-beta-glucan synthase component domain containing protein, expressed
Blast result AT2G36850 : 1.80E-63
Blast annotation: glucan synthase-like 8
2.Location
Scaffold: PH01000246
Strand: -
| Region | Start | End |
| gene | 348456 | 354693 |
| mRNA | 348456 | 354693 |
| exon | 348456 | 349209 |
| exon | 349741 | 349860 |
| exon | 350232 | 350342 |
| exon | 350549 | 350672 |
| exon | 352027 | 352181 |
| exon | 352300 | 352497 |
| exon | 353058 | 353122 |
| exon | 354341 | 354693 |
| CDS | 349090 | 349209 |
| CDS | 349741 | 349860 |
| CDS | 350232 | 350342 |
| CDS | 350549 | 350672 |
| CDS | 352027 | 352181 |
| CDS | 352300 | 352497 |
| CDS | 353058 | 353122 |
| CDS | 354341 | 354599 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.