Gene details

Annotation of co-expression genes

PH01000247G0580's details annotation

1.Annotation

ICBR annotation: vacuolar ATP synthase 98 kDa subunit, putative, expressed

Blast result AT4G39080 : 4.10E-49
Blast annotation: vacuolar proton ATPase A3

2.Location

Scaffold: PH01000247
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000312	proton-transporting V-type ATPase, V0 domain, phosphatidylinositol phosphorylation, ATP hydrolysis coupled proton transport, transcription, DNA-dependent, DNA-directed RNA polymerase activity, hydrogen ion transmembrane transporter activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF01496.18	V_ATPase_I	87	181

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0015078	hydrogen ion transmembrane transporter activity
GO:0015991	ATP hydrolysis coupled proton transport
GO:0033179	proton-transporting V-type ATPase, V0 domain

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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