PH01000248G0210's details annotation
1.Annotation
ICBR annotation: hexokinase, putative, expressed
Blast result AT4G29130 : 5.00E-156
Blast annotation: hexokinase 1
2.Location
Scaffold: PH01000248
Strand: +
| Region | Start | End |
| gene | 186534 | 190220 |
| mRNA | 186534 | 190220 |
| exon | 186534 | 187342 |
| exon | 188251 | 188584 |
| exon | 188753 | 188827 |
| exon | 188937 | 189092 |
| exon | 189382 | 190220 |
| CDS | 187155 | 187342 |
| CDS | 188251 | 188584 |
| CDS | 188753 | 188827 |
| CDS | 188937 | 189092 |
| CDS | 189382 | 189924 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000399 | cysteamine dioxygenase activity, Taurine_and_hypotaurine_metabolism Streptomycin_biosynthesis Butirosin_and_neomycin_biosynthesis Galactose_metabolism Fructose_and_mannose_metabolism |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00349.20 | Hexokinase_1 | 13 | 212 |
| PF03727.15 | Hexokinase_2 | 219 | 459 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Glycolysis / Gluconeogenesis | hexokinase [EC:2.7.1.1] | ko00010 | K00844 |
| Fructose and mannose metabolism | hexokinase [EC:2.7.1.1] | ko00051 | K00844 |
| Galactose metabolism | hexokinase [EC:2.7.1.1] | ko00052 | K00844 |
| Starch and sucrose metabolism | hexokinase [EC:2.7.1.1] | ko00500 | K00844 |
| Amino sugar and nucleotide sugar metabolism | hexokinase [EC:2.7.1.1] | ko00520 | K00844 |
| Streptomycin biosynthesis | hexokinase [EC:2.7.1.1] | ko00521 | K00844 |
| Butirosin and neomycin biosynthesis | hexokinase [EC:2.7.1.1] | K00844 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005524 | ATP binding |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016773 | phosphotransferase activity, alcohol group as acceptor |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.