Gene details

Annotation of co-expression genes

PH01000251G0020's details annotation

1.Annotation

ICBR annotation: casein kinase II subunit alpha-2, putative, expressed

Blast result AT3G50000 : 4.00E-150
Blast annotation: casein kinase II, alpha chain 2

2.Location

Scaffold: PH01000251
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001018	mitochondrial intermembrane space, CMGC_CK2 (from iTAK) mitochondrial electron transport, ubiquinol to cytochrome c, copper ion transport, ubiquinol-cytochrome-c reductase activity, copper chaperone activity, RNA-dependent DNA replication, Oxidative_phosphorylation Ribosome_biogenesis_in_eukaryotes

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Ribosome biogenesis in eukaryotes	casein kinase II subunit alpha [EC:2.7.11.1]	ko03008	K03097

10.Gene Ontology

GO Accession	GO Annotation
GO:0003723	RNA binding
GO:0003964	RNA-directed DNA polymerase activity
GO:0004672	protein kinase activity
GO:0004674	protein serine/threonine kinase activity
GO:0005524	ATP binding
GO:0006278	RNA-dependent DNA replication
GO:0006468	protein phosphorylation
GO:0016772	transferase activity, transferring phosphorus-containing groups

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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