Gene details

Annotation of co-expression genes

PH01000256G0450's details annotation

1.Annotation

ICBR annotation: AAA-type ATPase family protein, putative, expressed

Blast result AT1G64110 : 0
Blast annotation: P-loop containing nucleoside triphosphate hydrolases superfamily protein

2.Location

Scaffold: PH01000256
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000320	nicotinate phosphoribosyltransferase activity, nicotinate-nucleotide diphosphorylase (carboxylating) activity, adenylylsulfate_kinase_activity nicotinate nucleotide salvage, omega_peptidase_activity SNARE_interactions_in_vesicular_transport Nicotinate_and_nicotinamide_metabolism Nitrogen_metabolism sulfate assimilation, NAD biosynthetic process, nucleoside-triphosphatase activity, metal ion transmembrane transporter activity, ER to Golgi vesicle-mediated transport, magnesium_ion_transport transmembrane transport, cis-Golgi network, Golgi membrane,
coexpression network	CFinderM001487	regulation of sequence-specific DNA binding transcription factor activity, aromatic amino acid family metabolic process, RLK-Pelle_LRR-II (from iTAK) Metabolism_of_xenobiotics_by_cytochrome_P450 Drug_metabolism_-_cytochrome_P450 Basal_transcription_factors Glutathione_metabolism

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00004.28	AAA	534	664

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0000166	nucleotide binding
GO:0005524	ATP binding
GO:0017111	nucleoside-triphosphatase activity

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

    © 2017 All Rights Reserved.