PH01000260G0620's details annotation
1.Annotation
ICBR annotation: anaphase-promoting complex subunit 11, putative, expressed
Blast result AT5G20570 : 2.30E-17
Blast annotation: RING-box 1
2.Location
Scaffold: PH01000260
Strand: +
| Region | Start | End |
| gene | 447259 | 448577 |
| mRNA | 447259 | 448577 |
| exon | 447259 | 447848 |
| exon | 447948 | 448577 |
| CDS | 447701 | 447848 |
| CDS | 447948 | 448045 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000476 | Oxidative_phosphorylation mitochondrial envelope, mitochondrial_respiratory_chain_complex_III vesicle docking involved in exocytosis, mitochondrial electron transport, ubiquinol to cytochrome c, ATPase activity, coupled to transmembrane movement of substances, ubiquitin thiolesterase activity, Endocytosis Phagosome |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12861.6 | zf-ANAPC11 | 36 | 67 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.