PH01000260G1270's details annotation
1.Annotation
ICBR annotation: TOO MANY MOUTHS precursor, putative, expressed
Blast result AT3G25670 : 1.30E-97
Blast annotation: Leucine-rich repeat (LRR) family protein
2.Location
Scaffold: PH01000260
Strand: -
| Region | Start | End |
| gene | 847926 | 850272 |
| mRNA | 847926 | 850272 |
| exon | 847926 | 849104 |
| exon | 850024 | 850272 |
| CDS | 847962 | 849104 |
| CDS | 850024 | 850245 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF13855.5 | LRR_8 | 119 | 179 |
| PF00560.32 | LRR_1 | 242 | 263 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.