PH01000262G0450's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT2G29970 : 8.70E-39
Blast annotation: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
2.Location
Scaffold: PH01000262
Strand: +
| Region | Start | End |
| gene | 271161 | 274732 |
| mRNA | 271161 | 274732 |
| exon | 271161 | 272146 |
| exon | 272276 | 274732 |
| CDS | 271904 | 272146 |
| CDS | 272276 | 274243 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000095 | cysteine-type peptidase activity, drug transmembrane transporter activity, antiporter activity, drug transmembrane transport, |
| coexpression network | CFinderM000465 | HB-KNOX Transcription_Regulator(from iTAK) CK1_CK1 (from iTAK) TALE Transcription_Regulator(from PlantTFDB) |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07724.13 | AAA_2 | 373 | 483 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005524 | ATP binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.