PH01000264G0610's details annotation
1.Annotation
ICBR annotation: ATPase BadF/BadG/BcrA/BcrD type, putative, expressed
Blast result AT1G30540 : 5.00E-105
Blast annotation: Actin-like ATPase superfamily protein
2.Location
Scaffold: PH01000264
Strand: -
| Region | Start | End |
| gene | 442106 | 445581 |
| mRNA | 442106 | 445581 |
| exon | 442106 | 442341 |
| exon | 442577 | 442746 |
| exon | 443277 | 443405 |
| exon | 443873 | 444064 |
| exon | 444348 | 444495 |
| exon | 445227 | 445581 |
| CDS | 442304 | 442341 |
| CDS | 442577 | 442746 |
| CDS | 443277 | 443405 |
| CDS | 443873 | 444064 |
| CDS | 444348 | 444495 |
| CDS | 445227 | 445422 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01869.19 | BcrAD_BadFG | 21 | 277 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.