PH01000265G0020's details annotation
1.Annotation
ICBR annotation: tubulin/FtsZ domain containing protein, putative, expressed
Blast result AT2G36250 : 4.00E-166
Blast annotation: Tubulin/FtsZ family protein
2.Location
Scaffold: PH01000265
Strand: -
| Region | Start | End |
| gene | 8450 | 14234 |
| mRNA | 8450 | 14234 |
| exon | 8450 | 9333 |
| exon | 9408 | 9473 |
| exon | 9648 | 9740 |
| exon | 11108 | 11232 |
| exon | 11813 | 11903 |
| exon | 12043 | 12342 |
| exon | 12428 | 14234 |
| CDS | 9220 | 9333 |
| CDS | 9408 | 9473 |
| CDS | 9648 | 9740 |
| CDS | 11108 | 11232 |
| CDS | 11813 | 11903 |
| CDS | 12043 | 12342 |
| CDS | 12428 | 13030 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00091.24 | Tubulin | 110 | 271 |
| PF12327.7 | FtsZ_C | 321 | 415 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003924 | GTPase activity |
| GO:0005525 | GTP binding |
| GO:0005737 | cytoplasm |
| GO:0006184 | GTP catabolic process |
| GO:0043234 | protein complex |
| GO:0051258 | protein polymerization |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.