PH01000265G0040's details annotation
1.Annotation
ICBR annotation: M16 domain containing zinc peptidase, putative, expressed
Blast result AT5G56730 : 1.70E-88
Blast annotation: Insulinase (Peptidase family M16) protein
2.Location
Scaffold: PH01000265
Strand: -
| Region | Start | End |
| gene | 18450 | 23713 |
| mRNA | 18450 | 23713 |
| exon | 18450 | 20395 |
| exon | 20946 | 22176 |
| exon | 22920 | 23159 |
| exon | 23433 | 23713 |
| CDS | 19587 | 20395 |
| CDS | 20946 | 22176 |
| CDS | 22920 | 23159 |
| CDS | 23433 | 23483 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00834.18 | Ribul_P_3_epim | 114 | 201 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.