Gene details

Annotation of co-expression genes

PH01000271G0130's details annotation

1.Annotation

ICBR annotation: MYB family transcription factor, putative, expressed

Blast result AT2G47210 : 4.00E-136
Blast annotation: myb-like transcription factor family protein

2.Location

Scaffold: PH01000271
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000319	nucleoside_diphosphate_phosphorylation carbohydrate phosphorylation, histone_H4_acetylation UTP biosynthetic process, CTP biosynthetic process, histone_H2A_acetylation GTP biosynthetic process, aromatic amino acid family metabolic process, chromatin remodeling,
coexpression network	CFinderM000606	histone_H2A_acetylation CTP biosynthetic process, histone_H4_acetylation protein neddylation, nucleoside_diphosphate_phosphorylation UTP biosynthetic process, GTP biosynthetic process, carbohydrate phosphorylation, chromatin remodeling,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003682	chromatin binding
GO:0005634	nucleus
GO:0006281	DNA repair
GO:0006338	chromatin remodeling
GO:0035267	NuA4 histone acetyltransferase complex
GO:0043967	histone H4 acetylation
GO:0043968	histone H2A acetylation
GO:0045892	negative regulation of transcription, DNA-dependent

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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