PH01000275G0440's details annotation
1.Annotation
ICBR annotation: B12D protein, putative, expressed
Blast result AT3G48140 : 3.30E-29
Blast annotation: B12D protein
2.Location
Scaffold: PH01000275
Strand: -
| Region | Start | End |
| gene | 351452 | 353553 |
| mRNA | 351452 | 353553 |
| exon | 351452 | 352756 |
| exon | 353072 | 353160 |
| exon | 353490 | 353553 |
| CDS | 352609 | 352756 |
| CDS | 353072 | 353160 |
| CDS | 353490 | 353534 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000155 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF06522.10 | B12D | 13 | 80 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.