PH01000276G1070's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G34320 : 6.90E-72
Blast annotation: Protein of unknown function (DUF668)
2.Location
Scaffold: PH01000276
Strand: +
| Region | Start | End |
| gene | 692310 | 698780 |
| mRNA | 692310 | 698780 |
| exon | 692310 | 692880 |
| exon | 693303 | 693379 |
| exon | 694283 | 694350 |
| exon | 694544 | 694856 |
| exon | 695110 | 695200 |
| exon | 695519 | 695612 |
| exon | 695804 | 695895 |
| exon | 696703 | 696819 |
| exon | 697151 | 697227 |
| exon | 697475 | 698780 |
| CDS | 692728 | 692880 |
| CDS | 693303 | 693379 |
| CDS | 694283 | 694350 |
| CDS | 694544 | 694856 |
| CDS | 695110 | 695200 |
| CDS | 695519 | 695612 |
| CDS | 695804 | 695895 |
| CDS | 696703 | 696819 |
| CDS | 697151 | 697227 |
| CDS | 697475 | 697973 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF11961.7 | DUF3475 | 147 | 203 |
| PF05003.11 | DUF668 | 297 | 361 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.