PH01000277G0530's details annotation
1.Annotation
ICBR annotation: glucosidase 2 subunit beta precursor, putative, expressed
Blast result AT2G42390 : 7.00E-45
Blast annotation: protein kinase C substrate, heavy chain-related
2.Location
Scaffold: PH01000277
Strand: -
| Region | Start | End |
| gene | 503020 | 506122 |
| mRNA | 503020 | 506122 |
| exon | 503020 | 503350 |
| exon | 504002 | 504109 |
| exon | 504201 | 504386 |
| exon | 504554 | 504649 |
| exon | 505562 | 505675 |
| exon | 505751 | 506122 |
| CDS | 503328 | 503350 |
| CDS | 504002 | 504109 |
| CDS | 504201 | 504386 |
| CDS | 504554 | 504649 |
| CDS | 505562 | 505675 |
| CDS | 505751 | 505871 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12999.6 | PRKCSH-like | 29 | 139 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.