PH01000277G1000's details annotation
1.Annotation
ICBR annotation: DNA-binding protein-related, putative, expressed
Blast result AT4G28440 : 3.30E-41
Blast annotation: Nucleic acid-binding, OB-fold-like protein
2.Location
Scaffold: PH01000277
Strand: -
| Region | Start | End |
| gene | 795576 | 801962 |
| mRNA | 795576 | 801962 |
| exon | 795576 | 796723 |
| exon | 799747 | 799837 |
| exon | 800190 | 800248 |
| exon | 800411 | 801962 |
| CDS | 796533 | 796723 |
| CDS | 799747 | 799837 |
| CDS | 800190 | 800248 |
| CDS | 800411 | 800642 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.