PH01000277G1020's details annotation
1.Annotation
ICBR annotation: 1,3-beta-glucan synthase component, putative, expressed
Blast result AT4G03550 : 0.00E+00
Blast annotation: glucan synthase-like 5
2.Location
Scaffold: PH01000277
Strand: -
| Region | Start | End |
| gene | 805657 | 813548 |
| mRNA | 805657 | 813548 |
| exon | 805657 | 810862 |
| exon | 811033 | 813548 |
| CDS | 805946 | 810862 |
| CDS | 811033 | 811341 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| GlycosylTransferases | GT48 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF14288.5 | FKS1_dom1 | 123 | 235 |
| PF02364.14 | Glucan_synthase | 838 | 1638 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.